TY - JOUR
T1 - The complete mitochondrial genome of the blue runner, Caranx crysos (Mitchill, 1815) (Teleostei: Carangidae)
AU - Jeon, A. Young
AU - Lee, Ji Hyun
AU - Andriyono, Sapto
AU - Zuweh, J. Adonis
AU - Kim, Hyun Woo
N1 - Funding Information:
This work was supported by a Research Grant of Pukyong National University (2019).
Publisher Copyright:
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
PY - 2021
Y1 - 2021
N2 - Caranx crysos was collected from offshore of Sierra Leone and its complete mitochondrial genome was determined using next-generation sequencing (NGS). The circular mitogenome encoded a typical 37 genes, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and 22 tRNA genes. An unusual start codon (GTG) was identified for the COX1 gene, and incomplete stop codons (T–/TA–) were found in seven genes, including ND2, ND3, ND4, COX2, COX3, ATP6, and CytB. All tRNAs were predicted to fold into the typical clover-leaf structures, except for tRNASer-GCT, which lacks the D-arm. C. crysos formed a monoclade with the tree other species belonging to the genus Caranx, apart from the others. Among them, C. crysos was most closely related to Caranx melampygus and Caranx tille. The mitogenome sequence of C. crysos provides information for a better understanding of evolutionary relationships, systemic, and mitogenomic study within the family Carangidae.
AB - Caranx crysos was collected from offshore of Sierra Leone and its complete mitochondrial genome was determined using next-generation sequencing (NGS). The circular mitogenome encoded a typical 37 genes, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and 22 tRNA genes. An unusual start codon (GTG) was identified for the COX1 gene, and incomplete stop codons (T–/TA–) were found in seven genes, including ND2, ND3, ND4, COX2, COX3, ATP6, and CytB. All tRNAs were predicted to fold into the typical clover-leaf structures, except for tRNASer-GCT, which lacks the D-arm. C. crysos formed a monoclade with the tree other species belonging to the genus Caranx, apart from the others. Among them, C. crysos was most closely related to Caranx melampygus and Caranx tille. The mitogenome sequence of C. crysos provides information for a better understanding of evolutionary relationships, systemic, and mitogenomic study within the family Carangidae.
KW - Carangidae
KW - Caranx crysos
KW - mitogenome
KW - next-generation sequencing
UR - http://www.scopus.com/inward/record.url?scp=85105126512&partnerID=8YFLogxK
U2 - 10.1080/23802359.2021.1917319
DO - 10.1080/23802359.2021.1917319
M3 - Article
AN - SCOPUS:85105126512
SN - 2380-2359
VL - 6
SP - 1519
EP - 1520
JO - Mitochondrial DNA Part B: Resources
JF - Mitochondrial DNA Part B: Resources
IS - 4
ER -