TY - JOUR
T1 - Next-generation sequencing yields the complete mitochondrial genome of mud spiny lobster, Panulirus polyphagus (Crustacea: Decapoda) from Madura water
AU - Andriyono, S.
AU - Alam, M. J.
AU - Pramono, H.
AU - Abdillah, A. A.
AU - Kim, H. W.
N1 - Publisher Copyright:
© Published under licence by IOP Publishing Ltd.
PY - 2019/11/22
Y1 - 2019/11/22
N2 - The circular mitochondrial genome of the mud spiny lobster, Panulirus polyphagus was determined by next-generation sequencing (NGS) platform. The mitochondrial genome of P. polyphagus was 15,707 bp in length, which comprised 13 protein-coding genes, 22 tRNAs, two ribosomal RNAs (12S and 16S). A non-coding putative control region (739 bp) was located between 12S ribosomal RNA and tRNA-Ile. Except for COX1, 13 protein-coding genes initiated with the conventional start codon (ATG). The phylogenetic analysis with the mitogenomes in family Palinuridae showed P. polyphagus was clustered together with four congener species forming a clade, and Panulirus versicolor is closest to P. polyphagus.
AB - The circular mitochondrial genome of the mud spiny lobster, Panulirus polyphagus was determined by next-generation sequencing (NGS) platform. The mitochondrial genome of P. polyphagus was 15,707 bp in length, which comprised 13 protein-coding genes, 22 tRNAs, two ribosomal RNAs (12S and 16S). A non-coding putative control region (739 bp) was located between 12S ribosomal RNA and tRNA-Ile. Except for COX1, 13 protein-coding genes initiated with the conventional start codon (ATG). The phylogenetic analysis with the mitogenomes in family Palinuridae showed P. polyphagus was clustered together with four congener species forming a clade, and Panulirus versicolor is closest to P. polyphagus.
UR - http://www.scopus.com/inward/record.url?scp=85076573556&partnerID=8YFLogxK
U2 - 10.1088/1755-1315/348/1/012020
DO - 10.1088/1755-1315/348/1/012020
M3 - Conference article
AN - SCOPUS:85076573556
SN - 1755-1307
VL - 348
JO - IOP Conference Series: Earth and Environmental Science
JF - IOP Conference Series: Earth and Environmental Science
IS - 1
M1 - 012020
T2 - 2nd International Conference on Fisheries, Aquatic and Environmental Sciences 2019, ICFAES 2019, in conjunctions with the 6th Annual Conference of the Asian Society of Ichthyologist 2019, ASI 2019
Y2 - 19 June 2019 through 20 June 2019
ER -