TY - JOUR
T1 - Comparing genetic Mystacoleucus marginatus and Mystacoleucus padangensis (Cypriniformes: Cyprinidae) based on Cythochrome C Oxidase sub unit I (COI) gene
AU - Insani, Liga
AU - Jatayu, Diklawati
AU - Valen, Fitri Sil
AU - Widodo, Maheno Sri
AU - Hasan, Veryl
N1 - Publisher Copyright:
© 2022 Iranian Society of Ichthyology.
PY - 2022/12
Y1 - 2022/12
N2 - Mystacoleucus marginatus and M. padangenesis are freshwater fish species that found in Indonesia. Mystacoleucus marginatus is native to Indonesia and M. padangensis is an endemic species to West Sumatra, Indonesia. This study aimed to investigate the relationship between M. marginatus from the Berantas River, East Java, and M. padangensis from Singkarak Lake, West Sumatra based on the Cytochrome Oxidase subunit I (COI) gene. Based on the results, M. marginatus and M. padangenesis have a close genetic distance, with similarity of 99.81%, having difference of 3 nucleotide bases; then they can be identical or synonym. The nucleotide composition in M. marginatus and M. padangensis are almost similar where the percentage of nucleotide composition in M. marginatus is T (28.1%), C (29.2%), A (27.0%) and G (15.8%) and that of M. padangensis is T (28.3%), C (28.8%), A (26.8%) and G (16.2%). Based on phylogenetic tree, both species are closely related in the same cluster. Therefore, it is suggested they are a same species based on the COI gene, but suggesting further research using mitochondrial DNA complex and in-depth morphological analysis.
AB - Mystacoleucus marginatus and M. padangenesis are freshwater fish species that found in Indonesia. Mystacoleucus marginatus is native to Indonesia and M. padangensis is an endemic species to West Sumatra, Indonesia. This study aimed to investigate the relationship between M. marginatus from the Berantas River, East Java, and M. padangensis from Singkarak Lake, West Sumatra based on the Cytochrome Oxidase subunit I (COI) gene. Based on the results, M. marginatus and M. padangenesis have a close genetic distance, with similarity of 99.81%, having difference of 3 nucleotide bases; then they can be identical or synonym. The nucleotide composition in M. marginatus and M. padangensis are almost similar where the percentage of nucleotide composition in M. marginatus is T (28.1%), C (29.2%), A (27.0%) and G (15.8%) and that of M. padangensis is T (28.3%), C (28.8%), A (26.8%) and G (16.2%). Based on phylogenetic tree, both species are closely related in the same cluster. Therefore, it is suggested they are a same species based on the COI gene, but suggesting further research using mitochondrial DNA complex and in-depth morphological analysis.
KW - COI
KW - Cyprinidae
KW - DNA Barcoding
KW - Mystacoleucus
UR - http://www.scopus.com/inward/record.url?scp=85171592724&partnerID=8YFLogxK
U2 - 10.22034/iji.v9i4.903
DO - 10.22034/iji.v9i4.903
M3 - Article
AN - SCOPUS:85171592724
SN - 2383-1561
VL - 9
SP - 195
EP - 203
JO - Iranian Journal of Ichthyology
JF - Iranian Journal of Ichthyology
IS - 4
ER -